BrainWeb
VOLUME EXPLORER

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Local processing
Axial TRANSVERSE
SYNTHETIC DEMO
T1-weighted · Research use
ARLP
100%
Slice 81 / 160mm
3D reconstruction SURFACE + FIBERS
100%
Smooth surfaceDrag to rotate · scroll or use +/− to zoom
100
Sagittal LONGITUDINAL
SYNTHETIC DEMO
T1-weighted · Research use
SAPI
100%
Slice 81 / 160mm
Coronal FRONTAL
SYNTHETIC DEMO
T1-weighted · Research use
SRLI
100%
Slice 97 / 192mm
ABOUT BRAIN PIXEL

Brain Pixel

01

What we build

02

Imaging capabilities

    03

    Our vision

    04

    Founder

    Photo pending

    05

    Connect with Brain Pixel

    Brain Pixel is intended for research and educational visualization and is not a diagnostic medical device.

    BRAIN WEB

    Your imaging workspace.

    Explore MRI and CT volumes locally with linked 2D slices and a 3D surface view.

    Open your data

    Choose Open imaging folder to scan nested folders and pick a volume, or import DICOM and NIfTI files directly. NIfTI-1/2 single files, paired .hdr/.img files, and individual frames from 4D images are supported. Uncompressed grayscale DICOM with regular geometry, including native multi-frame with explicit spacing, is supported. Compressed or Enhanced DICOM with per-frame geometry, irregular spacing, and gantry tilt need conversion in a dedicated DICOM tool.

    Tractography

    Load a co-registered MRtrix .tck, TrackVis .trk, or ASCII VTK .vtk fiber bundle. For original DWI DICOM, use Reconstruct from DWI DICOM folder on the local server with MRtrix3 installed. The viewer loads the generated fibers over the matching b=0 image. Check diffusion gradients and review the result in dedicated software before interpretation; CT or T1 alone cannot generate tracts.

    Make it yours

    Scroll to change a slice. Click to link crosshairs. Drag with Window / level, Pan or Zoom selected. Ruler uses two clicks, and its marks also appear in 3D. Paint and Erase mark manual ROI in 2D and 3D; click the active tool again to stop. Drag the 3D view to rotate, use ⟳ to spin and ⛶ for full screen.

    Import INavigate VWindow / level WPan PZoom ZRuler MReset RHelp ?

    The sample is a procedural phantom, not a patient scan. Measurements, surfaces, and tract overlays are for exploration.